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Contents:

  • Installation
  • Tutorials
  • API
    • MOLPIPx package
    • MSA Files
  • Publications
  • Citing
  • About
MOLPIPx
  • API
  • MOLPIPx package
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MOLPIPx package

  • Load PIPs
    • detect_molecule()
    • get_functions()
    • list_of_strings()
    • parse_molecule()
  • Anisotropic PIPs and Models
    • EnergyPIPAniso
      • EnergyPIPAniso.__call__()
    • LayerPIPAniso
      • LayerPIPAniso.__call__()
    • PIPAniso
      • PIPAniso.__call__()
    • get_f_mask()
    • get_mask()
    • lambda_random_init()
  • Core PIPs
    • EnergyPIP
      • EnergyPIP.__call__()
    • PIP
      • PIP.__call__()
    • PIPlayer
      • PIPlayer.__call__()
    • PIPlayerGP
      • PIPlayerGP.__call__()
  • Generate PIPs
    • create_f_monomials()
    • create_f_polynomials()
    • f_monomial_flag_0()
    • msa_file_generator()
  • Deep PIP Kernels
    • PIPLayerKernel
      • PIPLayerKernel.__call__()
      • PIPLayerKernel.__post_init__()
  • PIP Neural Networks
    • MLP
      • MLP.__call__()
      • MLP.setup()
    • PIPNN
      • PIPNN.__call__()
      • PIPNN.setup()
  • Anisotropic Model Training
    • _train_aniso_adam()
  • Linear Model Training
    • training()
    • training_w_gradients()
  • Utilities
    • all_distances()
    • flax_params()
    • flax_params_aniso()
    • mae_loss()
    • morse_variables()
    • mse_loss()
    • softplus_inverse()
  • Gradient Utilities
    • get_energy_and_forces()
    • get_forces()
    • get_forces_gp()
    • get_pip_grad()
  • Training Utilities
    • split_train_and_test_data()
    • split_train_and_test_data_w_forces()
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